STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL13761.1Transcriptional regulator. (229 aa)    
Predicted Functional Partners:
KRL13762.1
Mannitol dehydrogenase.
 
   
 0.871
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
   
 0.838
prmC
Hypothetical protein; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
   
   0.832
KRL13506.1
Hypothetical protein.
   
   0.832
KRL13760.1
Hypothetical protein.
       0.773
KRL13768.1
Mannitol dehydrogenase domain-containing protein.
 
   
 0.743
KRL13838.1
Hypothetical protein.
  
 
 0.732
KRL12873.1
Bifunctional acetaldehyde-CoA alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.732
uxaC
Glucuronate isomerase.
 
   
 0.724
KRL13771.1
Succinate-semialdehyde dehydrogenase (NADP+).
  
 
 0.594
Your Current Organism:
Lactobacillus perolens
NCBI taxonomy Id: 1423792
Other names: L. perolens DSM 12744, Lactobacillus perolens DSM 12744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.