STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL13808.1Hypothetical protein. (450 aa)    
Predicted Functional Partners:
KRL13809.1
Alpha-mannosidase.
    0.964
KRL13806.1
Cell wall surface anchor family antigen.
    0.932
KRL13813.1
Sugar ABC transporter substrate-binding protein.
 
     0.811
KRL13812.1
Carbohydrate abc superfamily atp binding cassette transporter, membrane protein.
 
     0.803
KRL13811.1
Sugar abc transporter, permease protein.
 
     0.800
KRL13810.1
Hypothetical protein; Belongs to the glycosyl hydrolase 28 family.
     
 0.751
KRL13807.1
Transcription regulator.
 
     0.699
KRL13815.1
Histidine protein kinase.
 
     0.598
KRL13816.1
Response regulator.
 
     0.567
KRL14372.1
Endoglycosidase.
  
     0.515
Your Current Organism:
Lactobacillus perolens
NCBI taxonomy Id: 1423792
Other names: L. perolens DSM 12744, Lactobacillus perolens DSM 12744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.