STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL13862.1Cell surface hydrolase. (316 aa)    
Predicted Functional Partners:
KRL13864.1
Hypothetical protein.
   
 
 0.916
KRL08207.1
Hypothetical protein.
   
 
 0.890
KRL11938.1
Glycosyltransferase, group 1 family protein.
    
 
 0.841
KRL11128.1
Hypothetical protein.
    
 
 0.841
KRL10795.1
Beta-1,6-galactofuranosyltransferase.
    
 
 0.841
KRL10796.1
Beta-1,6-galactofuranosyltransferase.
    
 
 0.841
KRL08206.1
Glycosyltransferase.
    
 
 0.841
KRL08209.1
Hypothetical protein.
    
 
 0.841
KRL08072.1
Glycosyltransferase.
    
 
 0.841
KRL08073.1
rfaG.
    
 
 0.841
Your Current Organism:
Lactobacillus perolens
NCBI taxonomy Id: 1423792
Other names: L. perolens DSM 12744, Lactobacillus perolens DSM 12744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.