STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL13137.1pepD2 protein. (507 aa)    
Predicted Functional Partners:
KRL13135.1
ABC transporter ATPase.
    
  0.613
KRL13133.1
Hypothetical protein.
 
     0.583
KRL14664.1
Hypothetical protein.
    
 0.577
KRL10794.1
Hypothetical protein.
    
 0.577
KRL13136.1
ABC transporter permease.
       0.576
KRL11111.1
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein.
   
    0.520
KRL13359.1
Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
    0.520
KRL13134.1
Hypothetical protein.
       0.520
KRL13132.1
PadR family transcriptional regulator, regulatory protein PadR.
       0.517
KRL10773.1
Prolyl aminopeptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family.
  
   
 0.503
Your Current Organism:
Lactobacillus perolens
NCBI taxonomy Id: 1423792
Other names: L. perolens DSM 12744, Lactobacillus perolens DSM 12744
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