STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL12541.1Endolysin. (456 aa)    
Predicted Functional Partners:
KRL14690.1
Hypothetical protein.
 
  
 0.671
KRL11673.1
Hypothetical protein.
 
  
0.639
KRL12590.1
Hypothetical protein.
 
  
0.634
KRL14764.1
Alpha beta hydrolase superfamily protein.
  
     0.616
KRL08440.1
Hypothetical protein.
    
 0.616
KRL12536.1
Hypothetical protein.
 
     0.614
KRL14288.1
Hypothetical protein.
  
     0.584
KRL08854.1
Glycosyltransferase Family 51 candidate bifunctional family GT51 b-glycosyltransferase PBP transpeptidase (candidate murein polymerase).
  
  
 0.578
KRL12359.1
Hypothetical protein.
 
   
 0.558
KRL14402.1
Hypothetical protein.
    
 0.540
Your Current Organism:
Lactobacillus perolens
NCBI taxonomy Id: 1423792
Other names: L. perolens DSM 12744, Lactobacillus perolens DSM 12744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.