STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL12441.1Transcription regulator. (331 aa)    
Predicted Functional Partners:
KRL11073.1
Transportation permease, UpsA.
 
   
 0.789
KRL12791.1
Major facilitator superfamily permease.
 
   
 0.785
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
    
 0.773
KRL13702.1
Hypothetical protein.
  
     0.748
KRL12773.1
Hypothetical protein.
  
     0.743
KRL13003.1
Signal transduction protein.
  
   
 0.710
KRL12454.1
Hypothetical protein.
  
     0.695
KRL12399.1
Hypothetical protein.
  
     0.679
KRL09636.1
Hypothetical protein.
  
     0.641
KRL13527.1
Transcription regulator.
  
     0.638
Your Current Organism:
Lactobacillus perolens
NCBI taxonomy Id: 1423792
Other names: L. perolens DSM 12744, Lactobacillus perolens DSM 12744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.