STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL12251.1Hypothetical protein. (146 aa)    
Predicted Functional Partners:
KRL12247.1
Hypothetical protein.
 
    0.865
KRL12248.1
Cellobiose PTS, EIIC.
 
    0.839
KRL12249.1
Hypothetical protein.
       0.796
KRL12250.1
Hypothetical protein.
       0.773
KRL12243.1
Hypothetical protein.
 
     0.535
KRL13522.1
Hypothetical protein.
  
     0.478
KRL14765.1
Outer surface protein.
 
     0.471
KRL14764.1
Alpha beta hydrolase superfamily protein.
  
     0.455
KRL14203.1
Hypothetical protein.
  
     0.440
KRL13451.1
yvlB like protein.
  
     0.417
Your Current Organism:
Lactobacillus perolens
NCBI taxonomy Id: 1423792
Other names: L. perolens DSM 12744, Lactobacillus perolens DSM 12744
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.