STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM35910.1DMT family permease. (308 aa)    
Predicted Functional Partners:
KRM35909.1
Primosome, DnaD subunit.
  
    0.764
KRM35908.1
Hypothetical protein.
       0.582
KRM36795.1
Hypothetical protein.
  
  
  0.564
KRM35292.1
Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
 
  0.560
KRM37867.1
Cobalt transport protein.
  
 
  0.552
KRM36928.1
ABC superfamily ATP binding cassette transporter, permease protein.
  
 
  0.552
KRM35326.1
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein.
  
 
  0.510
KRM37462.1
ABC transporter, permease protein.
  
 
  0.510
KRM35694.1
Phosphate binding protein.
    
  0.474
pheT
Phenylalanine--trna ligase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
   0.433
Your Current Organism:
Lactobacillus pontis
NCBI taxonomy Id: 1423794
Other names: L. pontis DSM 8475, Lactobacillus pontis DSM 8475
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