STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM35359.1Tetratricopeptide repeat protein. (414 aa)    
Predicted Functional Partners:
KRM37617.1
Thioredoxin reductase.
  
 0.983
KRM37685.1
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. Belongs to the DHBP synthase family.
    
 0.964
KRM37398.1
Nucleoside-diphosphate kinase; Belongs to the NDK family.
   
 0.939
KRM35344.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.936
KRM35320.1
GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
    
 0.931
KRM35229.1
Hypothetical protein.
 
  
 0.875
KRM37356.1
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
 0.863
KRM35986.1
Thioredoxin reductase.
  
 0.858
KRM36922.1
Thioredoxin-disulfide reductase.
  
 0.858
KRM36978.1
Anaerobic ribonucleoside triphosphate reductase.
   
 0.824
Your Current Organism:
Lactobacillus pontis
NCBI taxonomy Id: 1423794
Other names: L. pontis DSM 8475, Lactobacillus pontis DSM 8475
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.