STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM38108.1TyrA protein. (238 aa)    
Predicted Functional Partners:
KRM38107.1
Dyp family peroxidase family protein.
     0.994
KRM37731.1
Xaa-pro dipeptidyl-peptidase; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline.
      
 0.454
KRM38109.1
C4-dicarboxylate anaerobic carrier, arginine transporter.
       0.451
KRM38110.1
M20A subfamily peptidase.
       0.431
KRM38106.1
ABC superfamily ATP binding cassette transporter, ABC protein.
       0.421
KRM35397.1
Nadh oxidase.
     
 0.416
Your Current Organism:
Lactobacillus pontis
NCBI taxonomy Id: 1423794
Other names: L. pontis DSM 8475, Lactobacillus pontis DSM 8475
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.