STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM37375.1ABC transporter, substrate-binding protein. (304 aa)    
Predicted Functional Partners:
KRM37373.1
Zinc iron ABC superfamily ATP binding cassette transporter, membrane protein.
 
 
 0.992
KRM37374.1
ABC transporter, ATP-binding protein.
 
 
 0.985
KRM35508.1
Iron-dependent repressor.
  
 
 0.804
KRM35326.1
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein.
    
 0.771
KRM37462.1
ABC transporter, permease protein.
    
 0.771
potA
Spermidine putrescine ABC superfamily ATP binding cassette transporter, ATPase; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
    
 0.653
KRM35645.1
Glycine betaine choline abc transporter substrate bindingcomponent.
    
  0.637
KRM36795.1
Hypothetical protein.
  
  
  0.635
KRM35694.1
Phosphate binding protein.
    
 0.608
KRM36395.1
Extracellular solute-binding protein.
     
 0.564
Your Current Organism:
Lactobacillus pontis
NCBI taxonomy Id: 1423794
Other names: L. pontis DSM 8475, Lactobacillus pontis DSM 8475
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