STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM37415.1ABC transporter permease component. (235 aa)    
Predicted Functional Partners:
KRM35387.1
ABC superfamily ATP binding cassette transporter, binding protein; Belongs to the nlpA lipoprotein family.
 0.999
KRM37413.1
ABC superfamily ATP binding cassette transporter, binding protein; Belongs to the nlpA lipoprotein family.
 0.999
metN
D-methionine ABC superfamily ATP binding cassette transporter, ABC protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 0.999
KRM35326.1
Amino acid ABC superfamily ATP binding cassette transporter, membrane protein.
    
 0.688
KRM37462.1
ABC transporter, permease protein.
    
 0.688
KRM37733.1
ABC transporter, permease protein.
    
  0.674
KRM37416.1
Succinyl-diaminopimelate desuccinylase.
       0.669
potA
Spermidine putrescine ABC superfamily ATP binding cassette transporter, ATPase; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
   
  0.657
KRM35325.1
ABC superfamily ATP binding cassette transporter, ABC protein.
   
 0.643
KRM36214.1
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-serine, forming acetyl-L-serine; Belongs to the MetA family.
  
    0.620
Your Current Organism:
Lactobacillus pontis
NCBI taxonomy Id: 1423794
Other names: L. pontis DSM 8475, Lactobacillus pontis DSM 8475
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