STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM37065.1ABC superfamily ATP binding cassette transporter. (404 aa)    
Predicted Functional Partners:
KRM37064.1
ABC transporter, ATP-binding protein EcsA.
 
  
 0.920
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.859
KRM37063.1
Protein hit.
     
 0.746
divIB
Cell-division initiation protein; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
     0.738
ezrA
Cell division regulatory protein; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.702
KRM36351.1
Adenine-specific methyltransferase.
 
     0.673
KRM36026.1
Regulator of replication initiation timing; Involved in initiation control of chromosome replication. Belongs to the YabA family.
  
     0.665
KRM35359.1
Tetratricopeptide repeat protein.
  
     0.632
KRM36363.1
Hypothetical protein.
  
     0.627
KRM37077.1
Replication initiation and membrane attachment family protein.
 
    0.601
Your Current Organism:
Lactobacillus pontis
NCBI taxonomy Id: 1423794
Other names: L. pontis DSM 8475, Lactobacillus pontis DSM 8475
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.