STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM36932.1Transporter, CPA2 family. (653 aa)    
Predicted Functional Partners:
KRM37729.1
Calcium-transporting ATPase.
   
 0.864
smc
Cell division protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
    
 0.704
KRM37619.1
TrkA C-terminal domain protein.
   
 
 0.634
KRM37064.1
ABC transporter, ATP-binding protein EcsA.
  
 
 0.629
KRM36183.1
Hypothetical protein.
  
 
 0.628
KRM37426.1
ABC transporter related.
  
 
 0.628
KRM36446.1
Multidrug resistance ABC superfamily ATP binding cassette transporter, membrane protein.
  
 0.625
KRM36447.1
ABC transporter, ATP-binding protein.
  
 0.625
KRM37515.1
ABC-type multidrug transport system, ATPase and permease component.
  
 0.625
KRM37458.1
Dehydrogenase.
  
 
  0.527
Your Current Organism:
Lactobacillus pontis
NCBI taxonomy Id: 1423794
Other names: L. pontis DSM 8475, Lactobacillus pontis DSM 8475
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.