STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malRTranscriptional regulator, LacI family. (319 aa)    
Predicted Functional Partners:
exuR
Transcriptional regulator, LacI family.
 
   
0.774
scrR
LacI family transcriptional regulator.
  
     0.770
KRL14958.1
Sugar-binding domain protein.
  
     0.767
KRL17316.1
Glutamate synthase (NADPH).
    
 
 0.718
araR
GntR family transcriptional regulator.
  
     0.712
KRL18312.1
Transporter, major facilitator family protein.
       0.697
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 
 0.652
KRL17012.1
Phosphocarrier protein HPr.
    
 
 0.605
ptsH
Phosphocarrier, HPr family.
    
   0.603
guaA_1
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
   0.578
Your Current Organism:
Lactobacillus rapi
NCBI taxonomy Id: 1423795
Other names: L. rapi DSM 19907 = JCM 15042, Lactobacillus rapi DSM 19907, Lactobacillus rapi DSM 19907 = JCM 15042, Lactobacillus rapi JCM 15042, Lactobacillus rapi JCM 15042 = DSM 19907
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