STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnQ4Glutamine ABC transporter, ATP-binding protein GlnQ. (211 aa)    
Predicted Functional Partners:
glnP2
Arginine ABC transporter, permease protein ArtQ.
 0.994
glnH2
ABC transporter, substrate-binding protein, family 3.
 0.990
glnPH2
Polar amino acid ABC transporter inner membrane subunit.
 0.990
glnP1
Glutamine ABC transporter permease protein GlnP.
 0.974
KRL16225.1
ABC transporter, permease protein.
 0.963
glnM
Polar amino acid ABC transporter inner membrane subunit.
 0.947
KRL17478.1
ABC transporter, permease protein.
 0.911
KRL17479.1
Polar amino acid ABC transporter inner membrane subunit.
 0.891
livC
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
    
 0.867
KRL17481.1
ABC transporter, substrate-binding protein, family 3.
 0.729
Your Current Organism:
Lactobacillus rapi
NCBI taxonomy Id: 1423795
Other names: L. rapi DSM 19907 = JCM 15042, Lactobacillus rapi DSM 19907, Lactobacillus rapi DSM 19907 = JCM 15042, Lactobacillus rapi JCM 15042, Lactobacillus rapi JCM 15042 = DSM 19907
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.