STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL18082.1Phosphonate-transporting ATPase. (233 aa)    
Predicted Functional Partners:
KRL16944.1
ABC transporter, ATP-binding protein.
 
    
0.907
KRL17554.1
Permease domain-containing protein.
 
 
 0.895
KRL18554.1
Hypothetical protein.
  
 0.818
KRL15401.1
Hypothetical protein.
   
 0.792
KRL17558.1
Efflux ABC transporter, permease protein.
   
 0.792
pstB1_2
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
 
   
0.704
glnPH2
Polar amino acid ABC transporter inner membrane subunit.
 
 
 0.697
KRL16968.1
ABC transporter, ATP-binding protein.
 
    
0.656
KRL18540.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
    
0.632
KRL17263.1
ABC transporter, ATP-binding protein.
 
    
0.628
Your Current Organism:
Lactobacillus rapi
NCBI taxonomy Id: 1423795
Other names: L. rapi DSM 19907 = JCM 15042, Lactobacillus rapi DSM 19907, Lactobacillus rapi DSM 19907 = JCM 15042, Lactobacillus rapi JCM 15042, Lactobacillus rapi JCM 15042 = DSM 19907
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.