STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL14878.1Transporter, major facilitator family protein. (278 aa)    
Predicted Functional Partners:
KRL14879.1
Transporter, major facilitator family protein.
     0.994
KRL14870.1
Hypothetical protein; Gph family glycoside-pentoside-hexuronide cation symporter.
 
     0.784
KRL15081.1
Transporter, major facilitator family protein.
  
     0.704
KRL14035.1
Transporter, major facilitator family protein.
 
     0.653
KRL14875.1
O-Glycosyl hydrolase family 30; Belongs to the glycosyl hydrolase 30 family.
  
     0.609
uidA_1
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
    0.448
KRL14818.1
Hypothetical protein; Belongs to the glycosyl hydrolase 28 family.
  
     0.414
uidA_2
Glycosyl hydrolase family 2, TIM barrel domain protein; Belongs to the glycosyl hydrolase 2 family.
  
    0.403
Your Current Organism:
Lactobacillus rapi
NCBI taxonomy Id: 1423795
Other names: L. rapi DSM 19907 = JCM 15042, Lactobacillus rapi DSM 19907, Lactobacillus rapi DSM 19907 = JCM 15042, Lactobacillus rapi JCM 15042, Lactobacillus rapi JCM 15042 = DSM 19907
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.