STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL17714.1Hypothetical protein. (191 aa)    
Predicted Functional Partners:
hepB2
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
       0.773
KRL16660.1
Glutamate-cysteine ligase.
  
     0.662
choS
ABC transporter, substrate-binding protein, QAT family.
       0.545
choQ
ABC transporter, ATP-binding protein.
       0.545
KRL17713.1
Hypothetical protein.
       0.535
gshR1
Pyridine nucleotide-disulfide oxidoreductase.
       0.521
KRL15809.1
Hypothetical protein.
  
     0.484
KRL17812.1
Hypothetical protein.
  
     0.469
KRL18527.1
CAAX amino terminal protease family protein.
  
     0.447
KRL18615.1
Hypothetical protein.
  
     0.446
Your Current Organism:
Lactobacillus rapi
NCBI taxonomy Id: 1423795
Other names: L. rapi DSM 19907 = JCM 15042, Lactobacillus rapi DSM 19907, Lactobacillus rapi DSM 19907 = JCM 15042, Lactobacillus rapi JCM 15042, Lactobacillus rapi JCM 15042 = DSM 19907
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.