STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL17543.1Transport protein. (457 aa)    
Predicted Functional Partners:
pts34B
PTS system, Lactose Cellobiose specific IIB subunit.
 
 
 0.994
KRL17540.1
PRD domain protein.
 
 
 0.976
pts34A
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
 
 0.943
KRL17550.1
PTS family L-ascorbate (L-asc) porter component IIC.
  
  
 
0.916
KRL17549.1
PTS system, Lactose Cellobiose specific IIB subunit.
 
 
 0.911
KRL17012.1
Phosphocarrier protein HPr.
    
  0.888
KRL17551.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
 
 
 0.816
KRL17534.1
PRD domain protein.
 
  
 0.735
ulaG
Hypothetical protein.
 
 0.700
KRL17039.1
Pyridine nucleotide-disulfide oxidoreductase.
   
    0.689
Your Current Organism:
Lactobacillus rapi
NCBI taxonomy Id: 1423795
Other names: L. rapi DSM 19907 = JCM 15042, Lactobacillus rapi DSM 19907, Lactobacillus rapi DSM 19907 = JCM 15042, Lactobacillus rapi JCM 15042, Lactobacillus rapi JCM 15042 = DSM 19907
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.