Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| agl | citB | FD12_GL001845 | FD12_GL002535 | Glycosyl hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family. | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.632 |
| agl | dnaJ | FD12_GL001845 | FD12_GL000447 | Glycosyl hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.670 |
| agl | gtfA | FD12_GL001845 | FD12_GL000130 | Glycosyl hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family. | Sucrose phosphorylase. | 0.732 |
| agl | melA | FD12_GL001845 | FD12_GL000997 | Glycosyl hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family. | Alpha-galactosidase. | 0.746 |
| agl | rnc | FD12_GL001845 | FD12_GL000314 | Glycosyl hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.625 |
| agl | rplS | FD12_GL001845 | FD12_GL000323 | Glycosyl hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.618 |
| agl | rpmA | FD12_GL001845 | FD12_GL000285 | Glycosyl hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family. | Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.618 |
| agl | rpmB | FD12_GL001845 | FD12_GL000308 | Glycosyl hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family. | Hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family. | 0.618 |
| agl | rpsP | FD12_GL001845 | FD12_GL000319 | Glycosyl hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family. | Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.618 |
| agl | scrK | FD12_GL001845 | FD12_GL000025 | Glycosyl hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family. | Fructokinase. | 0.736 |
| citB | agl | FD12_GL002535 | FD12_GL001845 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Glycosyl hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family. | 0.632 |
| citB | dnaJ | FD12_GL002535 | FD12_GL000447 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.724 |
| citB | rnc | FD12_GL002535 | FD12_GL000314 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.770 |
| citB | rplS | FD12_GL002535 | FD12_GL000323 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.807 |
| citB | rpmA | FD12_GL002535 | FD12_GL000285 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.766 |
| citB | rpmB | FD12_GL002535 | FD12_GL000308 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family. | 0.788 |
| citB | rpsP | FD12_GL002535 | FD12_GL000319 | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.766 |
| dnaJ | agl | FD12_GL000447 | FD12_GL001845 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | Glycosyl hydrolase, family 31; Belongs to the glycosyl hydrolase 31 family. | 0.670 |
| dnaJ | citB | FD12_GL000447 | FD12_GL002535 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.724 |
| dnaJ | rnc | FD12_GL000447 | FD12_GL000314 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.759 |
page 1 of 4