STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL17126.1LPXTG-motif protein cell wall anchor domain protein. (1036 aa)    
Predicted Functional Partners:
KRL16061.1
Competence damage-inducible protein CinA domain protein; Belongs to the CinA family.
     
 0.835
KRL18938.1
KxYKxGKxW signal domain protein.
  
  0.731
KRL14034.1
Hypothetical protein.
  
     0.723
KRL18936.1
Hypothetical protein.
 
 
 0.679
KRL14033.1
Hypothetical protein.
  
     0.660
KRL17897.1
Hypothetical protein.
  
  0.642
KRL16696.1
Hypothetical protein.
  
 
0.598
KRL18313.1
Hypothetical protein.
  
     0.594
KRL17527.1
Hypothetical protein.
  
  0.591
KRL14818.1
Hypothetical protein; Belongs to the glycosyl hydrolase 28 family.
   
   0.570
Your Current Organism:
Lactobacillus rapi
NCBI taxonomy Id: 1423795
Other names: L. rapi DSM 19907 = JCM 15042, Lactobacillus rapi DSM 19907, Lactobacillus rapi DSM 19907 = JCM 15042, Lactobacillus rapi JCM 15042, Lactobacillus rapi JCM 15042 = DSM 19907
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