STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL16672.1Purine catabolism regulatory protein. (553 aa)    
Predicted Functional Partners:
KRL16671.1
Major facilitator family transporter.
 
     0.839
KRL16682.1
Allantoin permease.
 
   
 0.807
allB
Allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.
 
   
 0.804
KRL16675.1
Hypothetical protein.
 
     0.783
KRL16683.1
Hypothetical protein.
 
     0.780
KRL16680.1
N-carbamoyl-L-amino-acid hydrolase.
 
   
 0.775
KRL16679.1
Allantoin catabolism protein.
  
     0.764
KRL16677.1
Membrane protein.
  
     0.762
KRL16676.1
Hypothetical protein.
  
     0.749
KRL17050.1
Major facilitator family transporter.
 
     0.651
Your Current Organism:
Lactobacillus rapi
NCBI taxonomy Id: 1423795
Other names: L. rapi DSM 19907 = JCM 15042, Lactobacillus rapi DSM 19907, Lactobacillus rapi DSM 19907 = JCM 15042, Lactobacillus rapi JCM 15042, Lactobacillus rapi JCM 15042 = DSM 19907
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