STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM99381.1Hypothetical protein. (167 aa)    
Predicted Functional Partners:
KRM99384.1
Site-specific DNA-methyltransferase (adenine-specific).
 
 
 0.965
KRM99380.1
Restriction modification system DNA specificity subunit.
 
     0.939
KRM99382.1
Phage integrase family protein; Belongs to the 'phage' integrase family.
 
   
 0.932
KRM99383.1
Type I site-specific restriction-modification system, S (specificity) subunit.
     0.930
KRM99379.1
Type I site-specific deoxyribonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
  
 0.770
atpF
F0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
    
 
 0.635
polA
DNA-directed DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
 
 0.629
KRM99687.1
Integral membrane protein.
 
    0.578
KRM95336.1
Hypothetical protein.
  
     0.481
KRM92792.1
Phage tape measure protein.
  
     0.471
Your Current Organism:
Lactobacillus rennini
NCBI taxonomy Id: 1423796
Other names: L. rennini DSM 20253, Lactobacillus rennini DSM 20253
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