STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM98743.1Chloride channel protein. (520 aa)    
Predicted Functional Partners:
KRM96161.1
TrkH family potassium uptake protein.
  
 
 0.823
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
 
  
 0.819
KRM97694.1
Competence damage-inducible protein A; Belongs to the CinA family.
    
 0.787
KRM97635.1
Pyruvate flavodoxin ferredoxin oxidoreductase family protein.
  
 
 0.786
KRM99513.1
16S rRNA methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.619
KRM98742.1
Hypothetical protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
       0.561
KRM95429.1
Molybdopterin biosynthesis protein, E chain.
  
    0.544
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
     
 0.526
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
       0.522
KRM97197.1
Na(+) H(+) antiporter.
     
 0.518
Your Current Organism:
Lactobacillus rennini
NCBI taxonomy Id: 1423796
Other names: L. rennini DSM 20253, Lactobacillus rennini DSM 20253
Server load: low (14%) [HD]