KRN00115.1 protein (Lactobacillus rennini) - STRING interaction network

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Score

KRN00115.1

Ribosomal protein L7A family protein. (101 aa)

Predicted Functional Partners:

rplJ

0.998

truB

0.998

rpsB

0.998

rpmD

0.998

rpsQ

0.998

rpsC

0.998

rplV

0.998

rpsS

0.998

rplW

0.998

rpsJ

0.998

Your Current Organism:

Lactobacillus rennini

NCBI taxonomy Id: 1423796
Other names: L. rennini DSM 20253, Lactobacillus rennini DSM 20253

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KRN00115.1	rplJ	FC24_GL001103	FC24_GL000920	Ribosomal protein L7A family protein.	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.998
KRN00115.1	rplV	FC24_GL001103	FC24_GL001252	Ribosomal protein L7A family protein.	50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.998
KRN00115.1	rplW	FC24_GL001103	FC24_GL001255	Ribosomal protein L7A family protein.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.998
KRN00115.1	rpmD	FC24_GL001103	FC24_GL001239	Ribosomal protein L7A family protein.	Hypothetical protein.	0.998
KRN00115.1	rpsB	FC24_GL001103	FC24_GL001115	Ribosomal protein L7A family protein.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.998
KRN00115.1	rpsC	FC24_GL001103	FC24_GL001251	Ribosomal protein L7A family protein.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.998
KRN00115.1	rpsJ	FC24_GL001103	FC24_GL001258	Ribosomal protein L7A family protein.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.998
KRN00115.1	rpsQ	FC24_GL001103	FC24_GL001248	Ribosomal protein L7A family protein.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.998
KRN00115.1	rpsS	FC24_GL001103	FC24_GL001253	Ribosomal protein L7A family protein.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.998
KRN00115.1	truB	FC24_GL001103	FC24_GL001100	Ribosomal protein L7A family protein.	Pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.998
rplJ	KRN00115.1	FC24_GL000920	FC24_GL001103	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Ribosomal protein L7A family protein.	0.998
rplJ	rplV	FC24_GL000920	FC24_GL001252	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.998
rplJ	rplW	FC24_GL000920	FC24_GL001255	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.998
rplJ	rpmD	FC24_GL000920	FC24_GL001239	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Hypothetical protein.	0.998
rplJ	rpsB	FC24_GL000920	FC24_GL001115	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.991
rplJ	rpsC	FC24_GL000920	FC24_GL001251	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.985
rplJ	rpsJ	FC24_GL000920	FC24_GL001258	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.984
rplJ	rpsQ	FC24_GL000920	FC24_GL001248	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.985
rplJ	rpsS	FC24_GL000920	FC24_GL001253	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.985
rplJ	truB	FC24_GL000920	FC24_GL001100	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.643