STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM98607.1Hypothetical protein. (339 aa)    
Predicted Functional Partners:
KRM99393.1
Transport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      0.859
murQ
N-acetylmuramic acid-6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
  
 0.832
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.807
KRM97217.1
D-alanyl-D-alanine carboxypeptidase precursor; Belongs to the peptidase S11 family.
     
 0.633
KRM94625.1
Beta-lactamase class C-like penicillin binding protein.
 
     0.629
KRM98610.1
TetR family transcriptional regulator.
 
   
 0.568
KRM98606.1
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
       0.562
KRM98609.1
Multidrug resistance ABC superfamily ATP binding cassette transporter, ABC membrane protein.
     
 0.504
KRM93028.1
Beta-lactamase class A.
    
 0.502
KRM98608.1
ABC transporter, ATP-binding and permease protein.
     
 0.500
Your Current Organism:
Lactobacillus rennini
NCBI taxonomy Id: 1423796
Other names: L. rennini DSM 20253, Lactobacillus rennini DSM 20253
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.