STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM97349.1Transposase, IS605 OrfB family protein. (499 aa)    
Predicted Functional Partners:
KRM95191.1
Hypothetical protein.
  
     0.774
KRM98641.1
Hypothetical protein.
  
     0.771
KRM98727.1
Hypothetical protein.
  
     0.769
KRM96265.1
ABC family transporter.
  
     0.756
KRM97338.1
Hypothetical protein.
  
     0.749
KRM97737.1
Alanine acetyl transferase.
  
     0.725
KRM98719.1
Hypothetical protein.
  
     0.721
KRM97340.1
Hypothetical protein.
  
     0.707
KRM99818.1
Monooxygenase.
  
     0.704
KRM97733.1
Hypothetical protein.
  
     0.696
Your Current Organism:
Lactobacillus rennini
NCBI taxonomy Id: 1423796
Other names: L. rennini DSM 20253, Lactobacillus rennini DSM 20253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.