STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM97183.1Putative membrane spanning protein. (495 aa)    
Predicted Functional Partners:
KRM97184.1
Hypothetical protein.
 
  
 0.932
KRM97182.1
Hypothetical protein.
 
  
 0.928
KRM97180.1
Group 2 glycosyl transferase.
 
 
 0.923
KRM97181.1
N-acetylglucosaminyltransferase.
 
 
 0.914
KRM97157.1
Ggdef domain protein.
 
   
 0.812
KRM97158.1
Cellulose synthase, catalytic subunit.
 
   
 0.812
KRM97185.1
mnaA protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.660
KRM94814.1
C-di-GMP-specific phosphodiesterase.
  
  
 0.577
KRM92845.1
Glycosyltransferase.
 
 
 0.465
Your Current Organism:
Lactobacillus rennini
NCBI taxonomy Id: 1423796
Other names: L. rennini DSM 20253, Lactobacillus rennini DSM 20253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.