STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM97130.1Bifunctional dimerization transpeptidase. (717 aa)    
Predicted Functional Partners:
KRM98582.1
Cell division membrane protein; Belongs to the SEDS family.
 
 0.957
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
  
 0.951
KRM99619.1
Cell division protein FtsW; Belongs to the SEDS family.
 
 0.943
KRM93015.1
Bifunctional glycolsyltransferase transpeptidase penicillin binding protein 2A.
 
 
 0.937
KRM98708.1
Penicillin-binding protein 1A.
 
 
 0.934
KRM98427.1
Bifunctional glycosyltransferase transpeptidase penicillin-binding protein 1B.
 
 
 0.924
KRM97761.1
Bifuntional dimerization transpeptidase.
  
  
0.923
murD
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
  
 0.918
divIB
Cell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
 
 
 0.915
KRM97131.1
Protein required for the initiation of cell division.
  
 
 0.864
Your Current Organism:
Lactobacillus rennini
NCBI taxonomy Id: 1423796
Other names: L. rennini DSM 20253, Lactobacillus rennini DSM 20253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.