STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM96681.1Hypothetical protein. (78 aa)    
Predicted Functional Partners:
KRM95718.1
Hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
  
     0.708
KRM99818.1
Monooxygenase.
  
     0.605
KRM93005.1
Aminoglycoside phosphotransferase.
  
     0.577
KRM95210.1
Hypothetical protein.
  
     0.540
mprF
Integral membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
       0.538
KRM98475.1
Hypothetical protein.
  
     0.534
KRM96679.1
Glycosyltransferase.
       0.530
KRM96682.1
Sulfatase.
       0.500
KRM98922.1
Extracellular protein precursor.
 
     0.488
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
   
    0.471
Your Current Organism:
Lactobacillus rennini
NCBI taxonomy Id: 1423796
Other names: L. rennini DSM 20253, Lactobacillus rennini DSM 20253
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.