STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL98683.1Glycosyltransferase, group 1 family protein. (343 aa)    
Predicted Functional Partners:
KRL98684.1
Hypothetical protein.
 
 
  0.772
KRL98680.1
Udp-glucose 4-epimerase.
 
 
  0.740
KRL98686.1
Glycosyltransferase.
 
 
  0.740
KRL98682.1
Glycosyltransferase.
 
 
  0.716
KRL98681.1
Bacterial sugar transferase.
 
  
 0.618
KRL98750.1
UDP-glucose 4-epimerase.
 
 
  0.599
KRL98487.1
Glycosyl transferase family 2.
  
 
  0.559
KRL98484.1
UDP-galactopyranose mutase.
  
 
 0.550
KRL98685.1
Hypothetical protein.
 
    
0.548
KRL97749.1
Glycosyltransferase.
 
  
 0.529
Your Current Organism:
Lactobacillus satsumensis
NCBI taxonomy Id: 1423801
Other names: L. satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis DSM 16230, Lactobacillus satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis JCM 12392, Lactobacillus satsumensis JCM 12392 = DSM 16230
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.