STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL98758.1Transcriptional regulator. (268 aa)    
Predicted Functional Partners:
KRL98767.1
PTS system sucrose-specific transporter subunit IIABC.
 
 
 0.921
KRL98699.1
Beta-glucosides PTS, EIIBCA.
  
 
 0.886
KRL97394.1
PTD system beta-glucoside-specific transporter subunit EIIBCA.
  
 
 0.886
KRM00308.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system eiiabc, probable trhalose specific.
  
 
 0.886
KRM00310.1
PTS system, trehalose-specific IIBC component.
  
 
 0.886
KRL97168.1
PTS system, sucrose-specific IIABC component.
  
 
 0.886
KRL96972.1
Transcriptional regulator.
  
     0.774
KRL97132.1
Transcriptional regulator.
  
     0.773
murQ
N-acetylmuramic acid-6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
  
 0.567
KRL96971.1
protein-N(pi)-phosphohistidine--sugar phosphotransferase.
  
 
 0.497
Your Current Organism:
Lactobacillus satsumensis
NCBI taxonomy Id: 1423801
Other names: L. satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis DSM 16230, Lactobacillus satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis JCM 12392, Lactobacillus satsumensis JCM 12392 = DSM 16230
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.