STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL98781.1Glycosyl hydrolase. (957 aa)    
Predicted Functional Partners:
KRL98782.1
Glycosyl hydrolase.
     0.938
KRM00033.1
XRE-family DNA-binding domain-containing protein.
  
     0.753
KRL96804.1
Exopolysaccharide biosynthesis protein.
  
     0.749
KRL97160.1
Hypothetical protein.
  
     0.546
KRL97198.1
NUDIX family hydrolase.
  
    0.543
KRL97141.1
Alpha beta fold family hydrolase.
  
     0.526
KRL97134.1
Fructan hydrolase.
  
 
  0.513
KRL97405.1
Hypothetical protein.
  
     0.498
KRL98905.1
Alpha beta fold family hydrolase.
  
     0.496
KRL97220.1
Sucrose-6-phosphate hydrolase; Belongs to the glycosyl hydrolase 32 family.
  
 
  0.486
Your Current Organism:
Lactobacillus satsumensis
NCBI taxonomy Id: 1423801
Other names: L. satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis DSM 16230, Lactobacillus satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis JCM 12392, Lactobacillus satsumensis JCM 12392 = DSM 16230
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