STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL98854.1Signal peptide protein, YSIRK family. (509 aa)    
Predicted Functional Partners:
KRL96748.1
Amino acid transporter.
  
     0.650
KRL97196.1
Amino acid permease.
  
     0.588
KRL99485.1
Ribonucleases G and E.
    
 0.533
KRL98712.1
Oligo-1,6-glucosidase (oligosaccharide alpha-1,6-glucosidase).
   
  0.437
KRL98725.1
Trehalose-6-phosphate hydrolase.
   
  0.437
KRM00307.1
Trehalose 6-P hydrolase.
   
  0.437
KRL97155.1
Trehalose-6-phosphate hydrolase.
   
  0.437
KRL96816.1
Alpha-glucosidase.
   
  0.437
Your Current Organism:
Lactobacillus satsumensis
NCBI taxonomy Id: 1423801
Other names: L. satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis DSM 16230, Lactobacillus satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis JCM 12392, Lactobacillus satsumensis JCM 12392 = DSM 16230
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.