STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL98889.1Di- and tricarboxylate transporter. (369 aa)    
Predicted Functional Partners:
KRL98890.1
Putative cell surface hydrolase (putative).
 
     0.767
KRL98891.1
Oxidoreductase.
  
  
 0.602
KRM00757.1
CPA2 family monovalent cation proton (H+) antiporter-2.
  
  
 0.526
KRL98824.1
Chloride channel protein.
  
  
 0.526
KRL98892.1
Enoyl-(acyl-carrier-protein) reductase II.
       0.505
KRL98699.1
Beta-glucosides PTS, EIIBCA.
  
  
 0.462
KRL98767.1
PTS system sucrose-specific transporter subunit IIABC.
  
  
 0.462
KRL97394.1
PTD system beta-glucoside-specific transporter subunit EIIBCA.
  
  
 0.462
KRM00308.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system eiiabc, probable trhalose specific.
  
  
 0.462
KRM00310.1
PTS system, trehalose-specific IIBC component.
  
  
 0.462
Your Current Organism:
Lactobacillus satsumensis
NCBI taxonomy Id: 1423801
Other names: L. satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis DSM 16230, Lactobacillus satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis JCM 12392, Lactobacillus satsumensis JCM 12392 = DSM 16230
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.