STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL98948.1Hypothetical protein; Belongs to the LysR transcriptional regulatory family. (296 aa)    
Predicted Functional Partners:
KRL98950.1
Hypothetical protein.
 
     0.823
KRL98949.1
Hypothetical protein.
       0.773
KRL99490.1
Hypothetical protein; Belongs to the LysR transcriptional regulatory family.
  
     0.752
KRL96910.1
Fhu operon transcription regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.750
KRL97239.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.661
KRL97114.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.639
KRL98947.1
Hypothetical protein.
 
     0.619
KRL97417.1
Glutamate synthase large subunit.
  
  
 0.554
KRL96858.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.482
KRL98946.1
Hypothetical protein.
       0.474
Your Current Organism:
Lactobacillus satsumensis
NCBI taxonomy Id: 1423801
Other names: L. satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis DSM 16230, Lactobacillus satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis JCM 12392, Lactobacillus satsumensis JCM 12392 = DSM 16230
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.