STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM00352.1Hypothetical protein. (78 aa)    
Predicted Functional Partners:
KRM00354.1
Copper importing ATPase.
 
 
 0.992
KRL97079.1
Copper transporting atpase.
 
 
 0.946
KRL99318.1
Lead, cadmium, zinc and mercury transporting ATPase.
 
 
 0.924
KRM00353.1
Hypothetical protein.
 
   
 0.921
KRM00355.1
CRP FNR family transcriptional regulator.
 
  
 0.833
KRM00351.1
Ferritin Dps family protein; Belongs to the Dps family.
  
  
 0.769
KRL97080.1
Hypothetical protein.
  
  
 0.761
rplN
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.608
KRL99063.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.526
KRL98469.1
AsnC family transcriptional regulator.
     
 0.452
Your Current Organism:
Lactobacillus satsumensis
NCBI taxonomy Id: 1423801
Other names: L. satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis DSM 16230, Lactobacillus satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis JCM 12392, Lactobacillus satsumensis JCM 12392 = DSM 16230
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.