STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL97676.1NAD(FAD)-dependent dehydrogenase. (456 aa)    
Predicted Functional Partners:
KRL97417.1
Glutamate synthase large subunit.
    
 0.929
KRL96749.1
NADH flavin oxidoreductase NADH oxidase.
  
 0.864
KRL99080.1
FAD FMN-containing dehydrogenase.
   
 
 0.684
KRM00196.1
Thioredoxin reductase.
    
 0.582
KRL97883.1
Amidohydrolase.
   
 
 0.570
KRL97063.1
Glutathione reductase.
 
 
 0.539
KRL98732.1
Ascorbate-specific PTS system enzyme IIC.
   
    0.504
KRL98869.1
Riboflavin synthase subunit alpha.
   
    0.504
rpmE2
Ribosomal protein L31.
   
    0.504
KRL97678.1
Cystathionine beta-lyase.
    
 0.487
Your Current Organism:
Lactobacillus satsumensis
NCBI taxonomy Id: 1423801
Other names: L. satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis DSM 16230, Lactobacillus satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis JCM 12392, Lactobacillus satsumensis JCM 12392 = DSM 16230
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