STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL97072.1Dehydrogenase-like protein. (326 aa)    
Predicted Functional Partners:
KRL97071.1
Ribose 5-phosphate isomerase.
 
    0.881
KRL97070.1
RpiR family transcriptional regulator.
 
     0.823
KRM00469.1
Ribokinase-like domain-containing protein.
  
 
 0.707
KRL98956.1
Xylose isomerase domain protein TIM.
  
 
 0.697
KRM00466.1
Binding-protein-dependent transport systems inner membrane component.
  
 
 0.697
KRL98505.1
Succinate-semialdehyde dehydrogenase (NAD(P)+); Belongs to the aldehyde dehydrogenase family.
   
 
 0.623
KRL97903.1
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.623
KRM00306.1
NAD-dependent aldehyde dehydrogenase.
   
 
 0.623
KRL97224.1
NAD-dependent aldehyde dehydrogenase.
   
 
 0.623
KRL97140.1
Bifunctional acetaldehyde-CoA alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.554
Your Current Organism:
Lactobacillus satsumensis
NCBI taxonomy Id: 1423801
Other names: L. satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis DSM 16230, Lactobacillus satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis JCM 12392, Lactobacillus satsumensis JCM 12392 = DSM 16230
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.