STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL97170.1Sucrose operon repressor. (332 aa)    
Predicted Functional Partners:
KRL97169.1
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.967
KRL97168.1
PTS system, sucrose-specific IIABC component.
 
  
 0.958
KRL97746.1
Phosphocarrier protein HPr.
   
 
 0.867
KRL98699.1
Beta-glucosides PTS, EIIBCA.
    
 0.858
KRL98767.1
PTS system sucrose-specific transporter subunit IIABC.
    
 0.858
KRL97394.1
PTD system beta-glucoside-specific transporter subunit EIIBCA.
    
 0.858
KRL97417.1
Glutamate synthase large subunit.
    
 
 0.858
KRM00308.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system eiiabc, probable trhalose specific.
    
 0.858
KRM00310.1
PTS system, trehalose-specific IIBC component.
    
 0.858
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 0.766
Your Current Organism:
Lactobacillus satsumensis
NCBI taxonomy Id: 1423801
Other names: L. satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis DSM 16230, Lactobacillus satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis JCM 12392, Lactobacillus satsumensis JCM 12392 = DSM 16230
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