STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL97017.1Oligopeptide-binding protein. (542 aa)    
Predicted Functional Partners:
KRL97013.1
Oligopeptide transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.955
KRL97016.1
Oligopeptide transport system permease.
 
 0.954
KRL97015.1
Peptide nickel transport system permease protein.
 
 0.946
KRL97014.1
Oligopeptide transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.929
KRL97192.1
Oligopeptide ABC superfamily ATP binding cassette transporter, binding protein.
  
  
 
0.818
KRL99075.1
ABC superfamily ATP binding cassette transporter, ABC protein; Belongs to the ABC transporter superfamily.
 
 0.785
KRL99078.1
Oligopeptide ABC transporter.
 
 
 0.659
KRL99074.1
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
 
 0.648
KRL99076.1
Oligopeptide-binding protein AppA.
  
 
0.611
KRL99077.1
Oligopeptide ABC transporter.
 
 
 0.585
Your Current Organism:
Lactobacillus satsumensis
NCBI taxonomy Id: 1423801
Other names: L. satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis DSM 16230, Lactobacillus satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis JCM 12392, Lactobacillus satsumensis JCM 12392 = DSM 16230
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.