STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL96754.1Mn-dependent transcriptional regulator. (222 aa)    
Predicted Functional Partners:
KRL96753.1
Hypothetical protein.
       0.773
metN
ABC superfamily ATP binding cassette transporter, binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
    
   0.768
KRL99504.1
Signal peptidase I; Belongs to the peptidase S26 family.
   
    0.715
KRL99181.1
ABC transporter permease.
  
 
 0.583
KRL99179.1
ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
 
 0.580
KRL99180.1
ABC transporter ATP-binding protein.
  
 
 0.570
KRL97913.1
Ferric uptake regulation protein; Belongs to the Fur family.
  
  
 0.442
KRL97025.1
Ferric uptake regulation protein; Belongs to the Fur family.
  
  
 0.436
KRL97814.1
Thioredoxin peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
  
 0.404
Your Current Organism:
Lactobacillus satsumensis
NCBI taxonomy Id: 1423801
Other names: L. satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis DSM 16230, Lactobacillus satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis JCM 12392, Lactobacillus satsumensis JCM 12392 = DSM 16230
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.