STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM00273.1Di- tripeptide transporter. (489 aa)    
Predicted Functional Partners:
KRM00257.1
Hypothetical protein.
   
  
 0.582
KRL96985.1
Hypothetical protein.
   
    0.560
KRM00348.1
Hypothetical protein.
   
    0.559
KRL96961.1
Aminopeptidase N.
   
 
 0.556
KRM00562.1
Methyl-accepting chemotaxis-like protein.
   
    0.539
KRL97558.1
Xaa-His dipeptidase.
      
 0.522
KRM00560.1
Xaa-Pro aminopeptidase.
 
   
 0.513
pepX
X-prolyl-dipeptidyl aminopeptidase; Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline; Belongs to the peptidase S15 family.
     
 0.507
KRL96793.1
Oligoendopeptidase O.
 
  
 0.505
lacD
Tagatose 1,6-diphosphate aldolase; Belongs to the aldolase LacD family.
   
    0.501
Your Current Organism:
Lactobacillus satsumensis
NCBI taxonomy Id: 1423801
Other names: L. satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis DSM 16230, Lactobacillus satsumensis DSM 16230 = JCM 12392, Lactobacillus satsumensis JCM 12392, Lactobacillus satsumensis JCM 12392 = DSM 16230
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