STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM93430.1Hypothetical protein. (69 aa)    
Predicted Functional Partners:
KRM93747.1
Hypothetical protein.
  
     0.749
KRM94521.1
Surface layer protein SlpB.
  
     0.724
KRM93177.1
Hypothetical protein.
  
     0.722
KRM93280.1
Hypothetical protein.
  
     0.721
KRM93117.1
Hypothetical protein.
  
     0.719
KRM94517.1
Surface layer protein.
  
     0.718
KRM94516.1
Surface layer protein.
  
     0.716
KRM94339.1
Surface layer protein.
  
     0.708
KRM94524.1
Hypothetical protein.
  
     0.708
KRM93227.1
Hypothetical protein.
  
     0.696
Your Current Organism:
Lactobacillus senioris
NCBI taxonomy Id: 1423802
Other names: L. senioris DSM 24302 = JCM 17472, Lactobacillus senioris DSM 24302, Lactobacillus senioris DSM 24302 = JCM 17472, Lactobacillus senioris JCM 17472, Lactobacillus senioris JCM 17472 = DSM 24302, Lactobacillus senioris YIT 12364, Lactobacillus sp. YIT 12364
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.