STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRM93235.1Hypothetical protein. (208 aa)    
Predicted Functional Partners:
KRM93242.1
Hypothetical protein.
 
     0.737
KRM93244.1
Hypothetical protein.
  
     0.704
KRM93214.1
CAAX amino terminal protease family protein.
  
     0.631
KRM94516.1
Surface layer protein.
  
     0.617
KRM94471.1
Hypothetical protein.
  
     0.615
KRM93353.1
Hypothetical protein.
  
     0.606
KRM94517.1
Surface layer protein.
  
     0.605
KRM94339.1
Surface layer protein.
  
     0.602
KRM93504.1
Hypothetical protein.
  
     0.598
KRM94348.1
Zn-dependent protease.
  
     0.594
Your Current Organism:
Lactobacillus senioris
NCBI taxonomy Id: 1423802
Other names: L. senioris DSM 24302 = JCM 17472, Lactobacillus senioris DSM 24302, Lactobacillus senioris DSM 24302 = JCM 17472, Lactobacillus senioris JCM 17472, Lactobacillus senioris JCM 17472 = DSM 24302, Lactobacillus senioris YIT 12364, Lactobacillus sp. YIT 12364
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.