STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN03226.1Hypothetical protein. (113 aa)    
Predicted Functional Partners:
KRN02155.1
Phage Mu gp47 related protein.
  
 
 0.870
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
    
  0.843
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.806
KRN01192.1
Type II secretory pathway competence component.
    
   0.697
KRN01193.1
Type II secretory pathway competence component, ATPase.
    
   0.697
KRN01880.1
Hypothetical protein.
  
 
  0.574
KRN02919.1
Hypothetical protein.
  
     0.561
KRN03225.1
Hypothetical protein.
       0.548
KRN02532.1
Zn-dependent protease.
  
     0.542
KRN02113.1
Hypothetical protein.
  
     0.493
Your Current Organism:
Lactobacillus senmaizukei
NCBI taxonomy Id: 1423803
Other names: L. senmaizukei DSM 21775 = NBRC 103853, Lactobacillus senmaizukei DSM 21775, Lactobacillus senmaizukei DSM 21775 = NBRC 103853, Lactobacillus senmaizukei L13, Lactobacillus senmaizukei NBRC 103853, Lactobacillus senmaizukei NBRC 103853 = DSM 21775
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.