STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN03238.1ABC transporter, permease protein. (259 aa)    
Predicted Functional Partners:
KRN03237.1
ABC transporter permease.
 
  0.996
KRN03236.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
 
  0.972
KRN03239.1
ABC transporter, solute-binding protein.
 
 
  0.958
KRN03234.1
Histidinol phosphate phosphatase HisJ family protein.
 
     0.925
KRN03235.1
Histidinol-phosphatase; Belongs to the PHP hydrolase family. HisK subfamily.
 
     0.849
KRN03379.1
Spermidine putrescine ABC transporter permease.
 
 
 
0.700
potA
ABC-type spermidine putrescine transport system, ATPase component; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
  0.623
KRN03378.1
Spermidine putrescine-binding periplasmic protein.
  
  
  0.567
KRN03380.1
Spermidine putrescine ABC transporter permease.
  
  
 
0.538
Your Current Organism:
Lactobacillus senmaizukei
NCBI taxonomy Id: 1423803
Other names: L. senmaizukei DSM 21775 = NBRC 103853, Lactobacillus senmaizukei DSM 21775, Lactobacillus senmaizukei DSM 21775 = NBRC 103853, Lactobacillus senmaizukei L13, Lactobacillus senmaizukei NBRC 103853, Lactobacillus senmaizukei NBRC 103853 = DSM 21775
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.