STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN02172.1Hypothetical protein. (69 aa)    
Predicted Functional Partners:
KRN02169.1
Hypothetical protein.
       0.746
KRN02170.1
Hypothetical protein.
       0.746
KRN02171.1
Hypothetical protein.
      
0.746
KRN02173.1
Hypothetical protein.
       0.476
KRN02174.1
Hypothetical protein.
       0.468
KRN02166.1
Hypothetical protein.
       0.446
KRN02167.1
Hypothetical protein.
       0.446
KRN02168.1
Hypothetical protein.
       0.446
KRN02175.1
Hypothetical protein.
       0.430
KRN02165.1
Hypothetical protein.
       0.428
Your Current Organism:
Lactobacillus senmaizukei
NCBI taxonomy Id: 1423803
Other names: L. senmaizukei DSM 21775 = NBRC 103853, Lactobacillus senmaizukei DSM 21775, Lactobacillus senmaizukei DSM 21775 = NBRC 103853, Lactobacillus senmaizukei L13, Lactobacillus senmaizukei NBRC 103853, Lactobacillus senmaizukei NBRC 103853 = DSM 21775
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.