STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN01807.1Signal transduction protein. (438 aa)    
Predicted Functional Partners:
KRN01808.1
Response regulator.
 
 
 0.971
KRN01806.1
Signal transduction protein.
 
    
0.840
KRN03239.1
ABC transporter, solute-binding protein.
   
   0.812
KRN02076.1
Hypothetical protein.
  
     0.758
KRN03057.1
Hypothetical protein.
  
     0.705
KRN03193.1
Hypothetical protein.
  
     0.703
KRN02706.1
NRPS condensation (elongation) domain-containing protein.
  
     0.690
KRN02936.1
Transcriptional regulator.
  
     0.686
KRN02061.1
AraC family transcriptional regulator.
 
  
  0.663
KRN02377.1
Hypothetical protein.
  
     0.626
Your Current Organism:
Lactobacillus senmaizukei
NCBI taxonomy Id: 1423803
Other names: L. senmaizukei DSM 21775 = NBRC 103853, Lactobacillus senmaizukei DSM 21775, Lactobacillus senmaizukei DSM 21775 = NBRC 103853, Lactobacillus senmaizukei L13, Lactobacillus senmaizukei NBRC 103853, Lactobacillus senmaizukei NBRC 103853 = DSM 21775
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.